BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H07LP1|AL425036
(1040 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1174 2024 0.0
>3x_Contig1174
Length = 6106
Score = 2024 bits (1019), Expect = 0.0
Identities = 1036/1041 (99%), Gaps = 2/1041 (0%)
Strand = Plus / Plus
Query: 1 atttccaatggtattcttcaaatgtgvtcatctataccatcaacgctgtttgaatgagga 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 919 atttccaatggtattcttcaaatgtggtcatctataccatcaacgctgtttgaatgagga 978
Query: 61 aacggattcagatttactctatagttgtcctcaatgtgttgtcgagacagaatcggcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 aacggattcagatttactctatagttgtcctcaatgtgttgtcgagacagaatcggcgaa 1038
Query: 121 gaaaactatggccacatataaaaattcctcacagaacgctaacttactaagagccgcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gaaaactatggccacatataaaaattcctcacagaacgctaacttactaagagccgcact 1098
Query: 181 ttctgatttagatgccaaggaagacagatttgccatcatatctgaattcatcggtaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 ttctgatttagatgccaaggaagacagatttgccatcatatctgaattcatcggtaaagg 1158
Query: 241 tggcctagatgatccggagtgtattattactcaaggataacaaatcacgtgatcgaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 tggcctagatgatccggagtgtattattactcaaggataacaaatcacgtgatcgaaaat 1218
Query: 301 cgagacatctagtttttccgctgtcatctaactgttttgctaactgtaatataacaaacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 cgagacatctagtttttccgctgtcatctaactgttttgctaactgtaatataacaaacg 1278
Query: 361 tttcatacatgattcatatatgaaacatgactacaactgcgacaaaatgatataaaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 tttcatacatgattcatatatgaaacatgactacaactgcgacaaaatgatataaaagga 1338
Query: 421 ccacaactcaagtccagtaggtttcagtaccttctctataagctgtggttgtttttttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 ccacaactcaagtccagtaggtttcagtaccttctctataagctgtggttgtttttttcc 1398
Query: 481 tccttcactgaatagtgttatagaactacccaaactcctattgttaatacgagcaaacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 tccttcactgaatagtgttatagaactacccaaactcctattgttaatacgagcaaacga 1458
Query: 541 tgataaagtcaagatactccacgtacttattaaattatccgtcaaataactccgttactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 tgataaagtcaagatactccacgtacttattaaattatccgtcaaataactccgttactc 1518
Query: 601 caataagaacttgtcgagaggacaaatatgtgctacctaatttttatcagacgaatcata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 caataagaacttgtcgagaggacaaatatgtgctacctaatttttatcagacgaatcata 1578
Query: 661 atccatattcaaattccttgtggaatacgtcggaagaaaacagagaagctttgaaaagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 atccatattcaaattccttgtggaatacgtcggaagaaaacagagaagctttgaaaagaa 1638
Query: 721 taaaaagaaagcgctgctagcaaacgcacaagggaagatgattgttctgacgatttggag 780
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 t-aaaagaaagcgctgctagcaaacgcacaagggaagatgattgttctgacgatttggag 1697
Query: 781 aaacaatcaattatatgggaatccgaacaggagcctcagagcaagaagacctattctcca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1698 aaacaatcaattatatgggaatccgaacaggagcctcagagcaagaagacctattctcca 1757
Query: 841 ttagatgttgaaacgtttagtcaaaaaatgaacttggattcagcaagacctgactcgaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1758 ttagatgttgaaacgtttagtcaaaaaatgaacttggattcagcaagacctgactcgaag 1817
Query: 901 actttatcgttcatccagactcttcaaaagcttttagagtctgagcmacaatacttcgaa 960
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1818 actttatcgttcatccagactcttcaaaagcttttagagtctgagcaacaatacttcgaa 1877
Query: 961 atgttgagtctatgtttatcaacttacaaggaagaagcatgccacaacaagaaattwagg 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1878 atgttgagtctatgtttatcaacttacaaggaagaagcatgccacaacaagaaatttagg 1937
Query: 1021 -acaaattgttgaatagagct 1040
||||||||||||||||||||
Sbjct: 1938 aacaaattgttgaatagagct 1958
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8103
Number of Sequences: 1807
Number of extensions: 8103
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1040
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1024
effective length of database: 10,329,639
effective search space: 10577550336
effective search space used: 10577550336
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)